Solutions
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liamgiles's post in Left Gen Issues was marked as the answerI looked in engine failures there were none, but then I realized that this was electrical, so I cleared all failures... I now feel like an idiot.
Thanks a lot, the frieghter now works and roaring like a beast, I will try the pax version just to double check.
EDIT: Everything works as it should as far as I can tell now. All of this due to looking in the wrong failures section -_-